Analysis of protein evolution as a communication system

Nidhal Bouaynaya; Dan Schonfeld

doi:10.1109/GENSIPS.2006.353137

Analysis of protein evolution as a communication system

Nidhal Bouaynaya, Dan Schonfeld

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Scopus citations

Abstract

We propose a protein communication system where the transmitted messages are protein sequences and the encoded message is the DNA. We study the evolutionary dynamics of this channel in both cases of constant and time-varying point mutation rate. We prove that the distribution of amino acids converges, at a geometric rate, to a limiting distribution.

Original language	English (US)
Title of host publication	2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006
Pages	23-24
Number of pages	2
DOIs	https://doi.org/10.1109/GENSIPS.2006.353137
State	Published - Dec 1 2006
Externally published	Yes
Event	2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006 - College Station, TX, United States Duration: May 28 2006 → May 30 2006

Publication series

Name	2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006

Other

Other	2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006
Country/Territory	United States
City	College Station, TX
Period	5/28/06 → 5/30/06

All Science Journal Classification (ASJC) codes

Biochemistry, Genetics and Molecular Biology (miscellaneous)
Computational Theory and Mathematics
Computer Vision and Pattern Recognition
Statistics and Probability

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10.1109/GENSIPS.2006.353137

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title = "Analysis of protein evolution as a communication system",

abstract = "We propose a protein communication system where the transmitted messages are protein sequences and the encoded message is the DNA. We study the evolutionary dynamics of this channel in both cases of constant and time-varying point mutation rate. We prove that the distribution of amino acids converges, at a geometric rate, to a limiting distribution.",

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series = "2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006",

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note = "2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006 ; Conference date: 28-05-2006 Through 30-05-2006",

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Bouaynaya, N & Schonfeld, D 2006, Analysis of protein evolution as a communication system. in 2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006., 4161758, 2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006, pp. 23-24, 2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006, College Station, TX, United States, 5/28/06. https://doi.org/10.1109/GENSIPS.2006.353137

Analysis of protein evolution as a communication system. / Bouaynaya, Nidhal; Schonfeld, Dan.

2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006. 2006. p. 23-24 4161758 (2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

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AU - Schonfeld, Dan

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M3 - Conference contribution

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BT - 2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006

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Analysis of protein evolution as a communication system

Abstract

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All Science Journal Classification (ASJC) codes

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